SWC dendrite pruner
inchinn
Code to downsample neuronal morphologies generated in SWC format, for example by the simple neurite tracer in FIJI.
Instructions
Load your SWC file as a 7 column wave
Call "Prune(SWC, spacing)"
where SWC is your neurone and spacing is your desired 3D distance between points.
Will generate a new wave called pruned and show you a projection of the two waves.
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Instructions
Load your SWC file as a 7 column wave
Call "Prune(SWC, spacing)"
where SWC is your neurone and spacing is your desired 3D distance between points.
Will generate a new wave called pruned and show you a projection of the two waves.
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Project Details
Current Project Release
SWC dendrite pruner IGOR.6.30.x-1.0
| Release File: | Dendrite Pruner.zip (70.62 KB) |
| Version: | IGOR.6.30.x-1.0 |
| Version Date: | |
| Version Major: | 1 |
| Version Patch Level: | 0 |
| OS Compatibility: | Mac-Intel Windows |
| Release Notes: |
Code to downsample neuronal morphologies generated in SWC format, for example by the simple neurite tracer in FIJI. Instructions Load your SWC file as a 7 column wave Call "Prune(SWC, spacing)" where SWC is your neurone and spacing is your desired 3D distance between points. Will generate a new wave called pruned and show you a projection of the two waves. |
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