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Graphics.ihfInterpolateIgor Reference.ihfmultiopenfilesortcuts.ihf*\")" easyHttp8g `\\4XOPState_EndNV_FlagV_FiterrorV_chisqr?V_numNaNsV_numINFs?V_npntsS@V_nterms$@V_nheld@V_startRowV_endRowS@V_startColV_endColV_startLayerV_endLayerV_startChunkV_endChunkV_fitItersV@V_logBayesn0uSS_fileNameyr |$)D:\Ed\DPhil\results INTER, May 10\A\w8339, loadMotofitPackage() Moto_loaddata() plotCalcref() Moto_loaddata() GENcurvefit/MAT=2/x=w8341_q/D=fit_w8341_R /k={100,10,0.7,0.5}/TOL = 0.001 motofit,w8341_R,coef_Cref,"1000000000",root:packages:motofit:old_genoptimise:GENcurvefitlimits FuncFit/H="1000000000"/N /M=2 Motofit coef_Cref w8341_R/X=w8341_q/D=fit_w8341_R Fit converged properly Motofit(coef_Cref,fit_w8341_R,w8341_q) fit_w8341_R=fit_w8341_R[p] coef_Cref={1,1.6171,-0.074382,2.1014,1.0156e-006,-0.0071461,3.7177,5.1991,10.143,2.5708} V_chisq= 3.57303;V_npnts= 78;V_numNaNs= 0;V_numINFs= 1; V_startRow= 0;V_endRow= 78; W_sigma={0,0.236,1.05e+03,1.05e+03,1.27e-05,8.78e+03,858,2.67e+03,2.11e+03,2.03e+03} Coefficient values one standard deviation K0 =1 0 K1 =1.6171 0.236 K2 =-0.074382 1.05e+003 K3 =2.1014 1.05e+003 K4 =1.0156e-006 1.27e-005 K5 =-0.0071461 8.78e+003 K6 =3.7177 858 K7 =5.1991 2.67e+003 K8 =10.143 2.11e+003 K9 =2.5708 2.03e+003 FuncFit/H="1000000000"/N /M=2 Motofit coef_Cref w8341_R/X=w8341_q/D=fit_w8341_R 9 iterations with no decrease in chi square Motofit(coef_Cref,fit_w8341_R,w8341_q) fit_w8341_R=fit_w8341_R[p] coef_Cref={1,1.1098,-0.3264,2.3837,2.2154e-006,0.30284,-3.4972,6.4835,-38.406,-8.4799} V_chisq= 0.645826;V_npnts= 78;V_numNaNs= 0;V_numINFs= 1; V_startRow= 0;V_endRow= 78; W_sigma={0,0.0719,21.9,21.9,7.26e-07,7.05,1.61,152,4.78e+03,1.86} Coefficient values one standard deviation K0 =1 0 K1 =1.1098 0.0719 K2 =-0.3264 21.9 K3 =2.3837 21.9 K4 =2.2154e-006 7.26e-007 K5 =0.30284 7.05 K6 =-3.4972 1.61 K7 =6.4835 152 K8 =-38.406 4.78e+003 K9 =-8.4799 1.86 GENcurvefit/MAT=2/x=w8341_q/D=fit_w8341_R /k={100,10,0.7,0.5}/TOL = 0.001 motofit,w8341_R,coef_Cref,"1000000000",root:packages:motofit:old_genoptimise:GENcurvefitlimits GENcurvefit/MAT=2/x=w8341_q/D=fit_w8341_R /k={100,10,0.7,0.5}/TOL = 0.001 motofit,w8341_R,coef_Cref,"1000000000",root:packages:motofit:old_genoptimise:GENcurvefitlimits Moto_loaddata() RemoveFromGraph fit_w8341_R GENcurvefit/MAT=2/x=w8339_q/D=fit_w8339_R /k={100,10,0.7,0.5}/TOL = 0.001 motofit,w8339_R,coef_Cref,"1111000000",root:packages:motofit:old_genoptimise:GENcurvefitlimits _______________________________ Genetic Optimisation Successful Fitting: w8339_R to Motofit V_fitIters = 88; V_Chisq = 0.586875; V_npnts= 78; V_nterms= 10; V_nheld= 4; V_logBayes = -77.8311 w[0] = 1 +/- 0 w[1] = 1 +/- 0 w[2] = 2.07 +/- 0 w[3] = 5 +/- 0 w[4] = 4.43032e-006 +/- 2.16558e-007 w[5] = 4.70017 +/- 26.1584 w[6] = 97.6863 +/- 9.2149 w[7] = 5.39636 +/- 3.89971e+006 w[8] = 65.5687 +/- 3.38759e+008 w[9] = 9.74538 +/- 0.623685 _______________________________ !6.x`i theoretical_R*g\8P?{Gzt?*3 a#><`#>a#>a#>a#>l`#>PC>2/}Σi>a XYT \8N]1a) |(z.BC|.f7lelmVÜ.A*U/RUs"ݎ> F/bֶEc#"“6U@ϊ7km)ud{zE,آTX qq+ W]\ F ?a` ՙ& %ѽ^% … f ~QP\=\E+(tpR]A3C:2Z*};AL&^1 o8mZOҵI$2_M፜OyF;6CǩK g/f`>?7 LRŪZ+r hFuf |H4+v#U&atC Jm+0I:68ƳH~R"0lނMw҇OǗ u?\e3%u16|!$<=o'7*32f"-z#/1T·35KĽ7¯Rނ972;A<@]>GQ?;q:RA+Pk$Ba& D(I|EuJFV#H JpI:ٿJjBJKN=Mq&zNџOc*p#PRrCS$dhTCUV$ԴWlX^Yb?Z<櫳[G\c]eW^eW&_wCT_AC`}Vaa)b&]-c2`zca7d+mWd(e7(Ien;ze@2fAf%fg9=gpg g<ggTKh.$hN(Mh`hk|h(}JLhS+hȻ1hS&$5hսh]:h§hU`Eh/tn5h&hShHBhv9 hXhi! iiYi%iI\/iU-8iBid5OLiyVic`i&Bji0 tiÇ}iC5iy~iTi!Ni{pŪiim5ipi;-cii4Vir\i~oiSOiiiעiVi uilMii̡j㟢jYv=jyj>yj-Dj`j@Ojn4j#j#jArj~juj8$;j} jԮjdcj֐j^j(^j3MEj j|j=j!jKwjcejjpgjXnjC~jDŽjyj q~j~%jWoPj/_jjoTjK-hjq+j&n j$̸\joj"4jhWjsj28jˌ H j󻭓 ja j! jc j jPO j_ jD jWI?s j8u jt jr  jv j| jw6 j^K js\ jFj jDu jF ~ j jY=c jVe jZՎ jc4 j;ԍ jfɋ j j jD[ j$l} j4 y j, t j'>p j_l j h jUOd jq$` j\^ j6~[ jGoY jW j^V j'V jOV j@YV jŸ W jfsTX jY j/[ j3^ j` jc j0:f jj j+|m j6q jvt jCHx j\| jJX jM( je jT jG j"Ғ j&D@ j jڻ j%ğ j{ jwe jx j$j jh jҮ j0Ͱ j j W jL+ j2X j8\ j* jK j j j j+ꅾ jx[9 jݿ jt j j j/( jjl jr j@ jy j jb jӻ jh' j]x j j1 jA0 j j6M j ŭ je jr jx j9 j̞ j3 ji j j=5 jₚ j9 j3.c j- j( j~ j+ jD j} jr& jQ jQ j, jϻK j8 j j1 j x jE j6[ j%B jT j jq$ j// j/e j4 jQ j j}* jV jL& j^ҫ j j j Q jщD jېg ju jG j j j js# j@ jC[ ja7v j/ jx jV ja jk~ jyN j` j~B4 j&oI jk^ jAr j j{ jګ j jw jT jpH j j jT" j1 jM@ jXUO j[v] j7k j4x j jH ję j: j7 j j܄ j2 j j.Ci theoretical_q?**{Gzt?F ax?{|?mJR?מY?8d`?g?~n?h u?鲘|?2%䃎?LqUwE?~oӟH?mQfL?k, P?jMS?Ih˹W?|fIZ?dF ^?bE a?a+e?F_Ah?y]`7l?[='o?YBs?X9v?CVzNz?; >?T?moB?W2ġ?E?ՐǢ?Ҥt{I?SW>ˣ?:M?Τ?8P?QOIҥ?j T?ͪզ? 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8 thosebeingvaried?  @@@@AAGj   limitsdialog_selwave ????@@@@@@@@@@@@J`j  / limitsdialog_listwave ????j ,X 4567892.2154e-060.30284-3.49726.4835-38.406-8.47990000004.4308e-06510012.96710010Parametercoeflower_limupper_lim$+2345678BCFLOQpx E0  limitsForThoseBeingVaried ????H6@BxOAB A : E0 GENcurvefitlimits ????D@ \@>@Y@)@Y@$@ *Id0TMW????(IReflectivityFittingReportReflectivityFittingReportReflectivity fitting report(O(O+*iy *iy $Normal < BHHHH$$xZrx:D D D D D D D D DH7!Fitted at: 22:00:23, 15 Dec 2011 Data: w8341_R vs w8341_q Levenberg Marquardt   Chi2 = NaN 1 +/- 0 1.6171 +/- 0.23573 -0.074382 +/- 1051.2 2.1014 +/- 1051.3 1.0156e-06 +/- 1.269e-05 -0.0071461 +/- 8783.5 Rlayer 1: 3.7177 +/- 858.19 5.1991 +/- 2674.3 10.143 +/- 2110.2 2.5708 +/- 2030.8  K__________________________________________________________________________ !Fitted at: 22:00:47, 15 Dec 2011 Data: w8341_R vs w8341_q Levenberg Marquardt   Chi2 = NaN 1 +/- 0 1.1098 +/- 0.071883 -0.3264 +/- 21.917 2.3837 +/- 21.918 2.2154e-06 +/- 7.2571e-07 0.30284 +/- 7.049 Tlayer 1: -3.4972 +/- 1.607 6.4835 +/- 151.88 -38.406 +/- 4782.9 -8.4799 +/- 1.8585  K__________________________________________________________________________ !Fitted at: 22:07:47, 15 Dec 2011 Data: w8339_R vs w8339_q Genetic Optimisation   Chi2 = inf 1 +/- 0 1 +/- 0 2.07 +/- 0 5 +/- 0 4.4303e-06 +/- 2.1656e-07 4.7002 +/- 26.158 [layer 1: 97.686 +/- 9.2149 5.3964 +/- 3.8997e+06 65.569 +/- 3.3876e+08 9.7454 +/- 0.62369  K__________________________________________________________________________ Z ,Dd2Zz :R.Nj  lt + ``- ``07 ``dB6PNG  IHDR AtEXtSoftwareIgor Pro&A7IDATxOnq$!@YͲ7 ,`t t9=D7*rqqLK<͇8R)%90!'&r`BNL 90!'&s"KRJ):uo@Ss"]{~wR~@]/6]˗a1"Kgur<,.⶞>㏑BяGuZ f[~'*n;Rdȯ0 BnI* !krnV39yS׿CR6ij[)O<-9pW4NSP[r! h.48v~?>P&zOr"kb @sьO(# b ]^RP[Q|9bˉ]L" *"ˉn;(ȃAԈSB| N9QDԈIEYOb NN'"z"> " >/>%9%SeyQyZ.9Ήt=^>RJW4R^F2 Nn'L!l?2!FNPw41>Ulf?7!ߤtCyY][TDLǽZd_>'qMMY2/)^Mx̎3%\ITMb2=bwM%VDWV֕zBߪ~:ωV ?Б׋-(,6ыx||B/i nĥ<# Bq5 c+J Ӝxt6QOȃyFN#!~jt1/1 #}A@FD0"D~';XQOˇ%X@ # z;a'p!N% 25yG~OAO]=i@>Z~Y籐%S)oM ObDL^)4Dr|[l S> 8Hu@/bV{RMzu'kCzDLvGoBc}qQ;&Y;Xy14Odt;*?.뀧QåO̷/bbD*/'UP^&߻ʒ:&< qv nGL/mH`0t"]˹(tgIc_wDzu^On込[!J^NyRngc鰄|]'`܎O"| 5 `ܮ+>wtWcB˥;}08c7ݼŽAyvw*OV0D<fDA#'ACU`ȉ;)/DTƱ C) pDN@Trڂ AC) dĝB 9q?y*'Aa T]r'.Q!'MUj@PȉDNDT 9y$( A!'Trc9@ȉe _?J 'e XWܕc*:CN8T^)J.nNΝ lj>()'d*i?UlxH7˷^v}(=*(,xHɤ{'}Ndɋyr_?MUˏ<:'zx^G \҃7bӟHdߖ\ P>eyNdt|^b.ըŪj81T2spit-/jc %eru\eNhd:x!4mh|p pOu$-8S=b8FMmAa r?DMֽnz6mzPD=+Ou3nn(3 ^}jE' C=<ʃ 'dW 7Rm7#'VWO43 D ޗG7ȉp\b캜tChPw D* wyn(Vb ON 'g([@ȉ 91e<> Z cXe־pFN ]]0\\+H B)/ ݂BNĪr՞(}[9XL? 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DefaultFont "Arial" OpenNotebook/N=ReflectivityFittingReport/W=(5.25,40.25,504.75,335)/J=111156/V=0 "ReflectivityFittingReport" as "Reflectivity fitting report" MoveWindow/P 5.25,40.25,504.75,335 MoveWindow/C 5.25,572.75,899.25,715.25 Table0() SLDpanel() reflectivitygraph() reflectivitypanel() Window reflectivitypanel() : Panel PauseUpdate; Silent 1 // building window... NewPanel /W=(544,50,1270,688) as "Reflectivity Panel" ModifyPanel cbRGB=(43520,43520,43520) ListBox baseparams,pos={92,52},size={146,146},proc=moto_modelchange,fSize=12 ListBox baseparams,frame=0 ListBox baseparams,listWave=root:packages:motofit:reflectivity:baselayerparams ListBox baseparams,selWave=root:packages:motofit:reflectivity:baselayerparams_selwave ListBox baseparams,mode= 6,editStyle= 1,widths={19,89,21} ListBox layerparams,pos={40,271},size={600,156},proc=moto_modelchange,fSize=12 ListBox layerparams,listWave=root:packages:motofit:reflectivity:layerparams ListBox layerparams,selWave=root:packages:motofit:reflectivity:layerparams_selwave ListBox layerparams,mode= 5,editStyle= 1 ListBox layerparams,widths={35,23,86,21,23,86,21,23,86,21,23,86,21} SetVariable FT_lowQ,pos={82,476},size={128,16},bodyWidth=60,proc=Moto_FTreflectivityhook,title="low Q for FFT" SetVariable FT_lowQ,limits={0.005,1,0.01},value= root:packages:motofit:reflectivity:tempwaves:FTlowQ SetVariable FThighQ,pos={78,496},size={132,16},bodyWidth=60,proc=Moto_FTreflectivityhook,title="high Q for FFT" SetVariable FThighQ,limits={0.005,1,0.01},value= root:packages:motofit:reflectivity:tempwaves:FThiQ SetVariable fringe,pos={148,543},size={166,16},disable=1,proc=Moto_fringespacing,title="layer thickness spacing" SetVariable fringe,limits={0,0,0},value= root:packages:motofit:reflectivity:tempwaves:fringe SetVariable numfringe,pos={174,522},size={137,16},disable=1,proc=Moto_fringespacing,title="number of fringes" SetVariable numfringe,limits={0,100,1},value= K0 TabControl foo,pos={7,2},size={716,633},proc=Moto_fooProc,tabLabel(0)="Fit" TabControl foo,tabLabel(1)="Constraints",tabLabel(2)="Make globals",value= 0 Button Dofit,pos={253,50},size={140,50},proc=Moto_genericButtonControl,title="Do fit" Button Dofit,help={"Performs the fit"},fColor=(65280,32512,16384) PopupMenu Typeoffit,pos={255,107},size={140,21},bodyWidth=140 PopupMenu Typeoffit,mode=1,popvalue="Genetic",value= #"\"Genetic;Levenberg-Marquardt;Genetic + LM;Genetic+MC_Analysis\"" Button loaddatas,pos={253,137},size={140,50},proc=Moto_genericButtonControl,title="Load data" Button loaddatas,fColor=(65280,32512,16384) PopupMenu dataset,pos={433,42},size={177,21},bodyWidth=139,proc=Motofit_PopMenuProc,title="dataset" PopupMenu dataset,mode=5,popvalue="w8339_R",value= #"Listmatch(WaveList(\"*_R\", \";\",\"\"),\"!coef*\")" CheckBox useerrors,pos={484,92},size={94,14},proc=Motofit_checkproc,title="use error wave?" CheckBox useerrors,value= 0 CheckBox usedQwave,pos={484,74},size={87,14},proc=Motofit_checkproc,title="use dQ wave?" CheckBox usedQwave,value= 0 PopupMenu coefwave,pos={439,118},size={171,21},bodyWidth=139,proc=Moto_changecoefs,title="Model" PopupMenu coefwave,mode=1,popvalue="coef_Cref",value= #"WaveList(\"coef*\",\";\",\"\")" CheckBox fitcursors,pos={483,155},size={116,14},proc=Motofit_checkproc,title="Fit between cursors?" CheckBox fitcursors,help={"To get the cursors on the graph press Ctrl-I. This enables you to fit over a selected x-range"} CheckBox fitcursors,value= 0 SetVariable res,pos={259,197},size={150,16},proc=Motofit_varproc,title="resolution dq/q %" SetVariable res,help={"Enter the resolution, dq/q in terms of a percentage. Use dq/q=0 to start with"} SetVariable res,limits={0,10,0.1},value= resolution[0] ValDisplay Chisquare,pos={252,230},size={170,14},title="Chi squared" ValDisplay Chisquare,limits={0,0,0},barmisc={0,1000} ValDisplay Chisquare,value= #"root:packages:motofit:reflectivity:chisq" PopupMenu plottype,pos={31,209},size={184,21},bodyWidth=140,proc=Moto_Plottype,title="Plot type" PopupMenu plottype,help={"you can change the plot type to whatever you want."} PopupMenu plottype,mode=1,popvalue="logR vs Q",value= #"\"logR vs Q;R vs Q;RQ4 vs Q\"" Button Savecoefwave,pos={622,134},size={95,24},proc=Moto_savecoefficients,title="Save model" Button Savecoefwave,fSize=10 Button loadcoefwave,pos={622,105},size={95,24},proc=Moto_genericButtonControl,title="Load model" Button loadcoefwave,fSize=10 Button Savefitwave,pos={623,31},size={93,42},proc=moto_savefitwave,title="Save reflectivity \rwaves" Button Savefitwave,fSize=10 Button Addcursor,pos={531,223},size={80,21},proc=Moto_addcursor,title="Add cursor" Button Addcursor,fSize=10 Button cursorleftA,pos={467,220},size={29,14},proc=Moto_cursorleft,title="<" Button cursorrightA,pos={495,220},size={29,14},proc=Moto_cursorright,title=">" Button cursorleftB,pos={467,235},size={29,14},proc=Moto_cursorleft,title="<" Button cursorrightB,pos={495,235},size={29,14},proc=Moto_cursorright,title=">" Button Addconstraint,pos={36,52},size={119,29},disable=1,proc=Moto_changeconstraint,title="Add constraint" Button Addconstraint,fSize=10 Button removeconstraint,pos={36,95},size={119,30},disable=1,proc=Moto_changeconstraint,title="Remove constraint" Button removeconstraint,fSize=10 CheckBox useconstraint,pos={483,172},size={111,14},proc=Motofit_checkproc,title="Fit with constraints?" CheckBox useconstraint,value= 0 CheckBox usemultilayer,pos={483,189},size={96,14},proc=Setupmultilayer,title="make multilayer?" CheckBox usemultilayer,value= 0 PopupMenu SLDtype,pos={27,236},size={187,21},bodyWidth=140,title="SLD type" PopupMenu SLDtype,mode=1,popvalue="Neutron",value= #"\"Neutron;Xray\"" TitleBox hold,pos={184,36},size={26,13},title="hold?",frame=0 TabControl thicknesstab,pos={40,430},size={600,200},proc=Moto_thicknesstabproc TabControl thicknesstab,tabLabel(0)="FFT of data",tabLabel(1)="Fringe spacing" TabControl thicknesstab,value= 0 PopupMenu con1,pos={415,196},size={137,21},disable=1,title="2nd contrast" PopupMenu con1,mode=1,popvalue="_none_",value= #"WaveList(\"coef*\",\";\",\"\") +\"_none_\"" PopupMenu con2,pos={415,223},size={134,21},disable=1,title="3rd contrast" PopupMenu con2,mode=27,popvalue="_none_",value= #"WaveList(\"coef*\",\";\",\"\") +\"_none_\"" PopupMenu con0,pos={415,170},size={133,21},disable=1,title="1st contrast" PopupMenu con0,mode=2,popvalue="_none_",value= #"WaveList(\"coef*\",\";\",\"\")+\"_none_\" " PopupMenu con3,pos={415,249},size={134,21},disable=1,title="4th contrast" PopupMenu con3,mode=4,popvalue="_none_",value= #"WaveList(\"coef*\",\";\",\"\") +\"_none_\"" PopupMenu con4,pos={415,276},size={134,21},disable=1,title="5th contrast" PopupMenu con4,mode=4,popvalue="_none_",value= #"WaveList(\"coef*\",\";\",\"\") +\"_none_\"" Button makeglobal,pos={342,38},size={162,76},disable=1,proc=Moto_Makeglobals,title="Make global coefficient wave" Button makeglobal,fSize=10 CheckBox g1,pos={52,63},size={55,14},disable=1,title="1. scale",value= 0 CheckBox g0,pos={52,43},size={109,14},disable=1,title="0. Number of layers" CheckBox g0,value= 1 CheckBox g2,pos={52,84},size={69,14},disable=1,title="2. SLD top",value= 0 CheckBox g3,pos={52,104},size={77,14},disable=1,title="3. SLD base",value= 0 CheckBox g4,pos={52,124},size={48,14},disable=1,title="4. bkg",value= 0 CheckBox g5,pos={52,146},size={62,14},disable=1,title="Sig_base",value= 0 CheckBox g6,pos={51,185},size={59,14},disable=1,title="6. thick1",value= 0 CheckBox g10,pos={51,206},size={65,14},disable=1,title="10. thick2",value= 0 CheckBox g14,pos={51,228},size={65,14},disable=1,title="14. thick3",value= 0 CheckBox g18,pos={51,250},size={65,14},disable=1,title="18. thick4",value= 0 CheckBox g22,pos={51,272},size={65,14},disable=1,title="22. thick5",value= 0 CheckBox g26,pos={51,294},size={65,14},disable=1,title="26. thick6",value= 0 CheckBox g30,pos={51,316},size={65,14},disable=1,title="30. thick7",value= 0 CheckBox g34,pos={51,338},size={65,14},disable=1,title="34. thick8",value= 0 CheckBox g38,pos={51,360},size={65,14},disable=1,title="38. thick9",value= 0 CheckBox g42,pos={51,382},size={71,14},disable=1,title="42. thick10",value= 0 CheckBox g43,pos={139,382},size={69,14},disable=1,title="43. SLD10",value= 0 CheckBox g39,pos={139,360},size={63,14},disable=1,title="39. SLD9",value= 0 CheckBox g35,pos={139,338},size={63,14},disable=1,title="35. SLD8",value= 0 CheckBox g31,pos={139,316},size={63,14},disable=1,title="31. SLD7",value= 0 CheckBox g27,pos={139,294},size={63,14},disable=1,title="27. SLD6",value= 0 CheckBox g23,pos={139,272},size={63,14},disable=1,title="23. SLD5",value= 0 CheckBox g19,pos={139,251},size={63,14},disable=1,title="19. SLD4",value= 0 CheckBox g15,pos={139,229},size={63,14},disable=1,title="15. SLD3",value= 0 CheckBox g11,pos={139,206},size={63,14},disable=1,title="11. SLD2",value= 0 CheckBox g7,pos={139,185},size={57,14},disable=1,title="7. SLD1",value= 0 CheckBox g8,pos={224,185},size={57,14},disable=1,title="8. Solv1",value= 0 CheckBox g12,pos={224,206},size={63,14},disable=1,title="12. Solv2",value= 0 CheckBox g16,pos={224,229},size={63,14},disable=1,title="16. Solv3",value= 0 CheckBox g20,pos={224,251},size={63,14},disable=1,title="20. Solv4",value= 0 CheckBox g24,pos={224,272},size={63,14},disable=1,title="24. Solv5",value= 0 CheckBox g28,pos={224,294},size={63,14},disable=1,title="28. Solv6",value= 0 CheckBox g32,pos={224,316},size={63,14},disable=1,title="32. Solv7",value= 0 CheckBox g36,pos={224,338},size={63,14},disable=1,title="36. Solv8",value= 0 CheckBox g40,pos={224,360},size={63,14},disable=1,title="40. Solv9",value= 0 CheckBox g44,pos={224,382},size={69,14},disable=1,title="44. Solv10",value= 0 CheckBox g45,pos={319,381},size={75,14},disable=1,title="45. rough10",value= 0 CheckBox g41,pos={319,360},size={69,14},disable=1,title="41. rough9",value= 0 CheckBox g37,pos={319,338},size={69,14},disable=1,title="37. rough8",value= 0 CheckBox g33,pos={319,316},size={69,14},disable=1,title="33. rough7",value= 0 CheckBox g29,pos={319,294},size={69,14},disable=1,title="29. rough6",value= 0 CheckBox g25,pos={319,271},size={69,14},disable=1,title="25. rough5",value= 0 CheckBox g21,pos={319,249},size={69,14},disable=1,title="21. rough4",value= 0 CheckBox g17,pos={319,227},size={69,14},disable=1,title="17. rough3",value= 0 CheckBox g13,pos={319,205},size={69,14},disable=1,title="13. rough2",value= 0 CheckBox g9,pos={319,184},size={63,14},disable=1,title="9. rough1",value= 0 PopupMenu nlayers,pos={170,39},size={125,21},disable=1,title="number of layers" PopupMenu nlayers,mode=3,popvalue="0",value= #"\"0;1;2;3;4;5;6;7;8;9;10\"" PopupMenu numcontrasts,pos={335,128},size={144,21},disable=1,title=" number of contrasts" PopupMenu numcontrasts,mode=2,popvalue="1",value= #"\"1;2;3;4;5;6;7;8;9;10\"" TitleBox compound,pos={498,128},size={50,20} TitleBox baseparam,pos={28,53},size={33,13},title="layers",fSize=12,frame=0 TitleBox baseparam,fStyle=1 TitleBox baseparam1,pos={15,72},size={63,13},title="scalefactor",fSize=12 TitleBox baseparam1,frame=0,fStyle=1 TitleBox baseparam2,pos={29,91},size={42,13},title="SLDtop",fSize=12,frame=0 TitleBox baseparam2,fStyle=1 TitleBox baseparam3,pos={10,110},size={82,13},title="SLD subphase",fSize=12 TitleBox baseparam3,frame=0,fStyle=1 TitleBox baseparam4,pos={35,129},size={21,13},title="bkg",fSize=12,frame=0 TitleBox baseparam4,fStyle=1 TitleBox baseparam5,pos={19,148},size={56,13},title="sub rough",fSize=12,frame=0 TitleBox baseparam5,fStyle=1 TitleBox baseparam6,pos={80,133},size={50,20} TitleBox baseparam0,pos={140,133},size={50,20} SetWindow kwTopWin,hook(FTplot)=Moto_FTplothook String fldrSav0= GetDataFolder(1) SetDataFolder root:packages:motofit:reflectivity:tempwaves: Display/W=(230,450,620,620)/HOST=# FFToutput SetDataFolder fldrSav0 Label bottom "size /A" Cursor/P/F/S=2/H=1 A FFToutput 0.5,0.5 TextBox/C/N=text0/F=0/A=MC/X=40.00/Y=40.00 "layer thickness: 1591.4 A" SetWindow kwTopWin,hook(FTplot)=Moto_FTplothook RenameWindow #,FFTplot SetActiveSubwindow ## EndMacro Window reflectivitygraph() : Graph PauseUpdate; Silent 1 // building window... Display /W=(9.75,37.25,560.25,377)/K=1 theoretical_R vs theoretical_q as "reflectivity graph" AppendToGraph w8341_R vs w8341_q AppendToGraph w8339_R vs w8339_q AppendToGraph fit_w8339_R vs fit_w8339_q ModifyGraph mode(w8341_R)=3,mode(w8339_R)=3 ModifyGraph rgb(w8341_R)=(1114,45306,14153),rgb(w8339_R)=(20860,15185,28043),rgb(fit_w8339_R)=(20860,15185,28043) ModifyGraph msize(w8341_R)=1,msize(w8339_R)=1 ModifyGraph logTicks(left)=10 ModifyGraph tickUnit=1 Label left "log(R)" Label bottom "Q /A\\S-1\\M" ErrorBars/T=0 w8341_R Y,wave=(w8341_E,w8341_E) ErrorBars/T=0 w8339_R Y,wave=(w8339_E,w8339_E) ControlBar 35 PopupMenu plottype,pos={166,7},size={144,21},bodyWidth=100,proc=Moto_Plottype,title="Plot type" PopupMenu plottype,mode=1,popvalue="logR vs Q",value= #"\"logR vs Q;R vs Q;RQ4 vs Q\"" Button Autoscale,pos={9,5},size={73,24},proc=Moto_genericButtonControl,title="Autoscale" Button Autoscale,fSize=10 Button ChangeQrange,pos={87,5},size={73,24},proc=Moto_genericButtonControl,title="Q range" Button ChangeQrange,fSize=10 Button Snapshot,pos={320,5},size={73,24},proc=Moto_genericButtonControl,title="snapshot" Button Snapshot,fSize=10 Button restore,pos={395,5},size={73,24},proc=Moto_genericButtonControl,title="restore" Button restore,fSize=10 Button refreshdata,pos={472,5},size={73,24},proc=Moto_genericButtonControl,title="refresh" Button refreshdata,fSize=10 SetWindow kwTopWin,userdata(refFiles)= A"6onRAA6_N!BPD9fEb0<7Cij_@8PW5R;Ciqb@X`1.6r7Q2Cg;!lF*2;@F!+%L<(0\\9+AH9i+>GQT6!SUn1G_$Q" Display/W=(0.6,0,1,0.5)/HOST=# sld,SLD_w8341,SLD_w8339 ModifyGraph rgb(sld)=(0,0,52224),rgb(SLD_w8341)=(1114,45306,14153),rgb(SLD_w8339)=(20860,15185,28043) ModifyGraph lblPos(left)=42,lblPos(bottom)=30 Label left "\\F'Symbol'r\\F'Arial' /10\\S-6\\M \\S-2 " Label bottom "z/" RenameWindow #,SLDplot SetActiveSubwindow ## EndMacro Window SLDpanel() : Panel PauseUpdate; Silent 1 // building window... NewPanel /K=1 /W=(0,50,520,370) as "SLDdatabase" TabControl sldtab,pos={1,2},size={511,305},proc=Moto_SldtabControl,fSize=12 TabControl sldtab,tabLabel(0)="calculator",tabLabel(1)="database" TabControl sldtab,tabLabel(2)="SLDmixing",value= 0 Button Addchemical,pos={20,50},size={110,30},disable=1,proc=Moto_add_chemical,title="Add chemical" Button Addchemical,fSize=12 PopupMenu listchemicals,pos={197,50},size={203,24},bodyWidth=100,disable=1,proc=Moto_updateSLDdisplay,title="List of chemicals" PopupMenu listchemicals,fSize=12 PopupMenu listchemicals,mode=3,popvalue="_none_",value= #"root:packages:motofit:reflectivity:SLDdatabase:chemicals" Button loaddatabase,pos={20,85},size={110,30},disable=1,proc=Moto_Loaddatabase,title="load database" Button loaddatabase,fSize=12 SetVariable neutronSLD,pos={220,90},size={180,19},bodyWidth=100,disable=1,title="Neutron SLD" SetVariable neutronSLD,fSize=12,value= k0 SetVariable XraySLD,pos={236,130},size={164,19},bodyWidth=100,disable=1,title="X-ray SLD" SetVariable XraySLD,fSize=12,value= k0 SetVariable rho,pos={217,170},size={183,19},bodyWidth=100,disable=1,title="Mass density" SetVariable rho,fSize=12,value= k0 Button savedatabase,pos={20,120},size={110,30},disable=1,proc=Moto_Savedatabase,title="Save database" Button savedatabase,fSize=12 SetVariable chemcom,pos={162,210},size={238,19},bodyWidth=100,disable=1,title="Chemical Composition" SetVariable chemcom,fSize=12,value= S_Value SetVariable chemical,pos={66,31},size={287,16},bodyWidth=200,proc=Moto_SLDcalculateSetvariable,title="Chemical Formula" SetVariable chemical,fSize=12 SetVariable chemical,limits={inf,inf,0},value= root:packages:motofit:reflectivity:SLDdatabase:calcSLD_chemical SetVariable calcMASSDENSITY,pos={18,60},size={200,16},proc=Moto_SLDcalculateSetvariable,title="Mass density" SetVariable calcMASSDENSITY,fSize=12 SetVariable calcMASSDENSITY,limits={0,100,0.02},value= root:packages:motofit:reflectivity:SLDdatabase:calcSLD_massdensity SetVariable calcMolVol,pos={236,60},size={230,16},proc=Moto_SLDcalculateSetvariable,title="Molecular volume (A^3)" SetVariable calcMolVol,fSize=12 SetVariable calcMolVol,limits={0,inf,1},value= root:packages:motofit:reflectivity:SLDdatabase:calcSLD_molvol SetVariable calcNeutronSLD,pos={88,171},size={263,16},bodyWidth=197,title="Neutron SLD" SetVariable calcNeutronSLD,fSize=12 SetVariable calcNeutronSLD,limits={-inf,inf,0},value= root:packages:motofit:reflectivity:SLDdatabase:calcSLD_neutron SetVariable calcXRAYSLD,pos={105,208},size={246,16},bodyWidth=197,title="Xray SLD" SetVariable calcXRAYSLD,fSize=12 SetVariable calcXRAYSLD,limits={-inf,inf,0},value= root:packages:motofit:reflectivity:SLDdatabase:calcSLD_Xray Button CALCULATE,pos={194,100},size={100,60},proc=Moto_SLDcalculateButton,title="Calculate" Button CALCULATE,fSize=12 Button AddToDataBase,pos={194,235},size={100,60},proc=Moto_addchemicalfromcalculator,title="Add to \r database" Button AddToDataBase,fSize=12 SetVariable mixSLD1,pos={29,57},size={200,23},disable=1,proc=Moto_mixCalculateSetvariable,title="SLD 1st component" SetVariable mixSLD1,fSize=12 SetVariable mixSLD1,limits={-inf,inf,0.01},value= root:packages:motofit:reflectivity:SLDdatabase:mixSLD1 SetVariable mixSLD2,pos={243,57},size={200,23},disable=1,proc=Moto_mixCalculateSetvariable,title="SLD 2nd component" SetVariable mixSLD2,fSize=12 SetVariable mixSLD2,limits={-inf,inf,0.01},value= root:packages:motofit:reflectivity:SLDdatabase:mixSLD2 SetVariable mixvolfrac1,pos={29,105},size={200,23},disable=1,proc=Moto_mixCalculateSetvariable,title="vol. frac. 1st component" SetVariable mixvolfrac1,fSize=12 SetVariable mixvolfrac1,limits={0,1,0.01},value= root:packages:motofit:reflectivity:SLDdatabase:mixvolfrac1 SetVariable mixvolfrac2,pos={243,105},size={200,23},disable=1,proc=Moto_mixCalculateSetvariable,title="vol. frac. 2nd component" SetVariable mixvolfrac2,fSize=12 SetVariable mixvolfrac2,limits={0,1,0},value= root:packages:motofit:reflectivity:SLDdatabase:mixvolfrac2 SetVariable mixoverallSLD,pos={164,246},size={160,23},disable=1,proc=Moto_mixCalculateSetvarReverse,title="Overall SLD" SetVariable mixoverallSLD,fSize=12 SetVariable mixoverallSLD,limits={-inf,inf,0.01},value= root:packages:motofit:reflectivity:SLDdatabase:mixOverallSLD EndMacro Window Table0() : Table PauseUpdate; Silent 1 // building window... Edit/W=(5.25,41.75,510,235.25) ModifyTable format=1 EndMacro Z#pragma rtGlobals=1 // Use modern global access method. #include "MOTOFIT_all_at_once"