4Misc_Start4PlatformŸ@ ROGIXXp55<4!*G(winspoolLeft Side VD Printer129.105.14.35Left Side VD PrinterC odLetterDGIS4DINU"ΕWH SMTJ{1EA0FA87-46BA-43ee-8804-16DE655C2E47}InputBinAutoSelectRESDLLUniresDLLPaperSizeLETTEROrientationPORTRAITMediaTypeAutoResolution600DPIPageOutputQualityNormalColorModeColorDocumentNUp1CollateONDuplexNONEOutputBinAutoStaplingNoneV4DM ROGIXXp55<4!*G(winspoolLeft Side VD Printer129.105.14.35Left Side VD PrinterC odLetterDGIS4DINU"ΕWH SMTJ{1EA0FA87-46BA-43ee-8804-16DE655C2E47}InputBinAutoSelectRESDLLUniresDLLPaperSizeLETTEROrientationPORTRAITMediaTypeAutoResolution600DPIPageOutputQualityNormalColorModeColorDocumentNUp1CollateONDuplexNONEOutputBinAutoStaplingNoneV4DM ROGIXXp55<4!*G(winspoolLeft Side VD Printer129.105.14.35Left Side VD PrinterC odLetterDGIS4DINU"ΕWH SMTJ{1EA0FA87-46BA-43ee-8804-16DE655C2E47}InputBinAutoSelectRESDLLUniresDLLPaperSizeLETTEROrientationPORTRAITMediaTypeAutoResolution600DPIPageOutputQualityNormalColorModeColorDocumentNUp1CollateONDuplexNONEOutputBinAutoStaplingNoneV4DM  ROGIXXp55<4!*G(winspoolLeft Side VD Printer129.105.14.35Left Side VD PrinterC odLetterDGIS4DINU"ΕWH SMTJ{1EA0FA87-46BA-43ee-8804-16DE655C2E47}InputBinAutoSelectRESDLLUniresDLLPaperSizeLETTEROrientationPORTRAITMediaTypeAutoResolution600DPIPageOutputQualityNormalColorModeColorDocumentNUp1CollateONDuplexNONEOutputBinAutoStaplingNoneV4DM^Graph*@@??r_WDashSettings#  !Normal@ Arial<HHHH$$Normal@ Arial<HHHH$$444444 Normal@ Arial<HHHH$$4 4 4 4 4 4 homePHdJmC:Users:Michael:Desktop:Depol Ratio Data:C:Users:Michael:Desktop:Depol Ratio Data5Mdh5dGQwjQw /w/w&L t!P L(#p {/w.c;/w~c~c0 RecentWindowsGraph0:yFano vs xFano;...Multi-peak Fit Set 4MultipeakFit_Set4:yFano2 vs xFano2;...Start Multi-peak FitTable0:Table1:xFanoTable2:yFano 4Misc_EndXOPState_Start`Data Browserstom ParametersurGizmol PeaksextWaveePeakFunctions24XOPState_EndCV_FlagV_chisqܚ턺>V_numNaNsV_numINFsV_npntsPp@V_nterms$@V_nheldV_startRowV_endRow@p@V_startColV_endColV_startLayerV_endLayerV_startChunkV_endChunkS_waveNames   yFano;S_pathames   )C:Users:Michael:Desktop:Depol Ratio Data:S_fileName    y1Fano.ibw xFano loaded from "Fano.ibw" LoadWave/H/E=1 "C:Users:Michael:Desktop:Depol Ratio Data:x1Fano.ibw" xFano loaded from "x1Fano.ibw" yFano loaded from "y1Fano.ibw" display yFano vs xFano Make/D/N=10/O W_coef W_coef[0] = {-1.0,-2.4e-6,7.1e-10,1.005,8e-4,25,1205,8e-5,18,1341} Make/O/T/N=1 T_Constraints T_Constraints[0] = {"K0 < 0"} FuncFit/NTHR=0 FanoFit2 W_coef yFano /X=xFano /D /C=T_Constraints Fit converged properly --Curve fit with constraints-- No constraints active or violated fit_yFano= FanoFit2(W_coef,x) W_coef={-0.76804,3.0723e-005,-1.1678e-008,0.9836,0.0016523,28.697,1198.1,0.00046399,36.08,1331.6} V_chisq= 1.58067e-006;V_npnts= 261;V_numNaNs= 0;V_numINFs= 0; V_startRow= 0;V_endRow= 260; W_sigma={0.015,2.75e-06,1.11e-09,0.00171,2.98e-05,0.592,0.282,1.66e-05,2.64,0.623} Coefficient values one standard deviation q =-0.76804 0.015 m =3.0723e-005 2.75e-006 c =-1.1678e-008 1.11e-009 d =0.9836 0.00171 A1 =0.0016523 2.98e-005 g1 =28.697 0.592 z1 =1198.1 0.282 A2 =0.00046399 1.66e-005 g2 =36.08 2.64 z2 =1331.6 0.623 TextBox/C/N=text0/A=MC "Plot of two Fano peaks \rfitted with basic curve fitting" duplicate yFano yFano2 duplicate xFano xFano2 display yFano2 vs xFano2 ShowInfo SetAxis left 1.002,1.0068272 ShowInfo SetAxis left 1.0033472,1.007 SetAxis bottom 1100.1953,1500 ManPeakInsertHookProc got keycode 8 RemoveFromGraph fit_yFano2 RemoveFromGraph fit_yFano2 !@2T JCCxFano@????臱DaDN;DDDWȰDD{DMUD.DD1DͻDhDoDHD,"DDNծDܮDhDaDz;DDDȭDD{D|TD-DkDDRDÓD1mDFD DoDҫD8DD^DW8DD DbĪDD wDYPD)DD>ܩDDˎDhDPADDDͨDADxDXD1D D=DiDDoDHD"D%DEԦDbD|D_D8DDDåDDuDOD (DDڤDDDeD >DDDȣDᡣDzDSD,DDyޢD^DAD!iDBDDD̡DcD6~DWD/DDnD7DDkDDDCDDΟDvD-DXD1DE DDDJDlDED:DD{ϝDDDJYD1Du DDD$DlD8EDDDDΛDFDD@XD0D1 DDDDjDeCDD7D̙DDb}DUD.DyDޘD(D|DgD@DjDDȗDEDyDQD *DJDږDDD+cD^;DDDÕDD:tD_LD$DDԔDެDD]D&5D: DKDZDfDqmDyEDDD͒DD}D|UDt-DjD^ݑDPD@D-eD=DDDĐDDtDkLDF$DDӏDʫDDm[D:3D DDD[DjDADDWDɍDǠD|xD.PD'DD8׌D⮌DD.^D5Dq DDDDDkDpCDDD!ʊDD6yDPDC(DDF׉DĮD@DTJLLyFano@?????곀???????굀????ⵀ??? ?G??\??v?b?綀?u??????X??!?L?c?.?ղ??F?????@?(??ΰ??4??ޭ??ʬ?+?;?l??7?u?????????Ԩ????ۮ??U?f???涀?f??E?3??Z? ??Y? ??ɽ?i?b???(???ڽ?Ƽ?K??Ƽ?4?Ề?ֻ? ??Һ?n?㺀?ں?չ?ø????H??k???????ч???Ή???a?l?_?:??H??N?B?À?pȀ?΀?{Ѐ?Ӏ?~ր?ـ?ۀ?p݀?ހ?݀?ހ?&߀?n߀?߀?߀?V݀?݀?݀?V݀?`ۀ?ڀ?ـ?ـ?ـ?׀?:Հ?ր?Ԁ?Ԁ? Ԁ?yҀ?Ҁ?Ѐ?Ѐ?tπ?π?΀?̀?̀?ˀ?@ˀ?(ˀ?ˀ?ɀ?<ɀ?ɀ?Ȁ?ǀ?ǀ?Tǀ?ƀ?3ǀ?FĀ?Ā?Kŀ?À?+€?À?€???ܿ?P???:????f??_?*?? nGXx5fit_yFano@????0@X{5 Bg?1?t?2e?3Y?]A??ȱ?p?|-?iS =?3 L?ӑ\?kl?_ E}?h^?g?Ʋ߯?>vH??E?xd?g4 ?:?ĉ0?iDPD?rqY?Tm?NyP?Y 8?^?KT?d?l/˰?v?F)?[C?ۘ^?%>Fz?5?{/?(??Ŏ ?Sb)Q*?7G?(c?}??-?̔,?2p?by?ܕ?``g?d?v?9?{v2Z?%an?°w]?6?B`B?a @?P@ ?ERU?6g?/?q*b?3'a?Ay?gHZ?V?Υ?q{6P?i w?TYU?Qs ?F?E?K%?l?ly~?XZH?ht? ?g/?%G?f2?"1?f֑SQ?myp?Әi?&t?uK?b?7|? u.n?峟C%?NGE;?jP?*/ e?x?jK'?>4֞?n ?8?$??+90?? ?p5$?}2P3?$B?ĮP?Z| _?TA"m??hz?i ?[??Dޯ?(T?vc?h?13?;? ?t=?#f?e?H}\ ?O ? ?3 ?#6?8V]?ѝ?O߶;?!y?}UrH?D?<3? ?{qP??O?G2?;L?sm?IZ?i[P?`L?e|zN?IT?d0G&]?)h?t?^?0?4~x?4H/?<?t?&? $??p?4?(t??*{C?Ba"?-8*?b$1?"Q7?Z>?<̹C?RI?|P^N?4 S?`W?_[?  _?kb?e?D2Kh?Tj?lm?o? tp?:lr?jܾs?t?u?upv?-\v?>w?17^w?իPw?fit_yFano= FanoFit2(W_coef,x) W_coef={-0.76804,3.0723e-005,-1.1678e-008,0.9836,0.0016523,28.697,1198.1,0.00046399,36.08,1331.6} V_chisq= 1.58067e-006;V_npnts= 261;V_numNaNs= 0;V_numINFs= 0; V_startRow= 0;V_endRow= 260; W_sigma={0.015,2.75e-06,1.11e-09,0.00171,2.98e-05,0.592,0.282,1.66e-05,2.64,0.623} Coefficient values one standard deviation q =-0.76804 0.015 m =3.0723e-005 2.75e-006 c =-1.1678e-008 1.11e-009 d =0.9836 0.00171 A1 =0.0016523 2.98e-005 g1 =28.697 0.592 z1 =1198.1 0.282 A2 =0.00046399 1.66e-005 g2 =36.08 2.64 z2 =1331.6 0.623 Xy5" W_coef@ ????!}ǪΓ迱Q?dÎ2I^y?i3 [?Ǒj<@>Q@z_|h>?v(/ B@1iΔ@3Fy5T_Constraints@????"z5K0 < 0z5"" W_sigma@ ????$笎?>/GL>탚>i\?VfSRL>9=?PG?`'p>+]#@xOo?T@JпyFano2@????3?곀???????굀????ⵀ??? ?G??\??v?b?綀?u??????X??!?L?c?.?ղ??F?????@?(??ΰ??4??ޭ??ʬ?+?;?l??7?u?????????Ԩ????ۮ??U?f???涀?f??E?3??Z? ??Y? ??ɽ?i?b???(???ڽ?Ƽ?K??Ƽ?4?Ề?ֻ? ??Һ?n?㺀?ں?չ?ø????H??k???????ч???Ή???a?l?_?:??H??N?B?À?pȀ?΀?{Ѐ?Ӏ?~ր?ـ?ۀ?p݀?ހ?݀?ހ?&߀?n߀?߀?߀?V݀?݀?݀?V݀?`ۀ?ڀ?ـ?ـ?ـ?׀?:Հ?ր?Ԁ?Ԁ? Ԁ?yҀ?Ҁ?Ѐ?Ѐ?tπ?π?΀?̀?̀?ˀ?@ˀ?(ˀ?ˀ?ɀ?<ɀ?ɀ?Ȁ?ǀ?ǀ?Tǀ?ƀ?3ǀ?FĀ?Ā?Kŀ?À?+€?À?€???ܿ?P???:????f??_?*??YTJxFano2@????4臱DaDN;DDDWȰDD{DMUD.DD1DͻDhDoDHD,"DDNծDܮDhDaDz;DDDȭDD{D|TD-DkDDRDÓD1mDFD DoDҫD8DD^DW8DD DbĪDD wDYPD)DD>ܩDDˎDhDPADDDͨDADxDXD1D D=DiDDoDHD"D%DEԦDbD|D_D8DDDåDDuDOD (DDڤDDDeD >DDDȣDᡣDzDSD,DDyޢD^DAD!iDBDDD̡DcD6~DWD/DDnD7DDkDDDCDDΟDvD-DXD1DE DDDJDlDED:DD{ϝDDDJYD1Du DDD$DlD8EDDDDΛDFDD@XD0D1 DDDDjDeCDD7D̙DDb}DUD.DyDޘD(D|DgD@DjDDȗDEDyDQD *DJDږDDD+cD^;DDDÕDD:tD_LD$DDԔDެDD]D&5D: DKDZDfDqmDyEDDD͒DD}D|UDt-DjD^ݑDPD@D-eD=DDDĐDDtDkLDF$DDӏDʫDDm[D:3D DDD[DjDADDWDɍDǠD|xD.PD'DD8׌D⮌DD.^D5Dq DDDDDkDpCDDD!ʊDD6yDPDC(DDF׉DĮD@D PackagesLBv oPJ!5 MultiPeakFit2v oPJ!X5currentSetNumber@MPF2_DontShowHelpMessageMPF2_PanelVersion333333@MPF2_DoFitHelpBoxTextqӛvfMTo get started, add peaks to the list. Either click the \f01Auto-locate Peaks\f]0 button, above, or drag a marquee on the graph and select \f01Add or Edit Peaks\f]0 from the marquee menu.TraceInfoForAddOrEditDatavfMXWAVE:xFano2;YAXIS:left;XAXIS:bottom;AXISFLAGS:;AXISZ:NaN;XWAVEDF:root:;YRANGE:[*];XRANGE:[*];ERRORBARS:;RECREATION:zColor(x)=0;zColorMax(x)=0;zColorMin(x)=0;zmrkSize(x)=0;zmrkNum(x)=0;zpatNum(x)=0;textMarker(x)=0;arrowMarker(x)=0;mask(x)=0;patBkgColor(x)=0;useNegPat(x)=0;hBarNegFill(x)=0;usePlusRGB(x)=0;plusRGB(x)=(65535,0,0);useNegRGB(x)=0;negRGB(x)=(65535,0,0);toMode(x)=0;mode(x)=0;marker(x)=0;lSize(x)=1;lStyle(x)=0;lSmooth(x)=0;rgb(x)=(65535,0,0);msize(x)=0;mrkThick(x)=0.5;opaque(x)=0;hbFill(x)=0;gaps(x)=1;live(x)=0;quickdrag(x)=0;mskip(x)=0;cmplxMode(x)=0;hideTrace(x)=0;useMrkStrokeRGB(x)=0;mrkStrokeRGB(x)=(0,0,0);useBarStrokeRGB(x)=0;barStrokeRGB(x)=(0,0,0);offset(x)={0,0};muloffset(x)={0,0}; MPF_SetFolder_1 oPJ!hiMPF2ConstraintsShowingnegativePeaksdisplayPeaksFullWidthpanelPositionMPF2_UserCursorsMPF2OptionsShowingXPointRangeBeginXPointRangeEnd@p@XPointRangeReversed?AutoFindNoiseLevelJ?AutoFindSmoothFactor@AutoFindTrimFraction?MPF2_FitCurvePoints[bs@MPF2_FitDateE2YAMPF2_FitPointsPp@MPF2_FitChiSqf!?YWvName6v0fM$"3 root:yFano2XWvName6v0fM$"3 root:xFano2GraphName6v0fM$"3Graph1MPF2WeightWaveNameM$"3MPF2MaskWaveNameeM$"3interPeakConstraints"3FuncListStringaints"3{Linear_BLFunc, root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Baseline Coefs', EPSW=root:Packages:MultiPeakFit2:MPF_SetFolder_1:blepswave, STRC=BLStruct}{MPFXGaussPeak,root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 0 Coefs', EPSW=root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 0 Coefseps'}{MPFXGaussPeak,root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 1 Coefs', EPSW=root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 1 Coefseps'}{MPFXGaussPeak,root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 2 Coefs', EPSW=root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 2 Coefseps'}{MPFXGaussPeak,root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 3 Coefs', EPSW=root:Packages:MultiPeakFit2:MPF_SetFolder_1:'Peak 3 Coefseps'}SavedFunctionTypess"3Linear;Gauss;Gauss;Gauss;Gauss;6PhiBaseline Coefshi????'?ǤFMBzBiHoldStringshi????i00G\iconstraintsTextWavehi????iMINK0:;MAXK0:;MINK1:;MAXK1:;iW_AutoPeakInfohi????DAړDyښDD%AgAiARA9S;:G\:0@)A_AąA@ۿ]Aa$AąAX(i6fit_yFano2hi6f????0@>???o???d??€? 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(?V[e&?=l%?U($?^d"?4!?G± ?O ?1)1?3?kz5?lcV?Q0?z`Ql?v?rA#w?b@u &?9 H) ?,d ?V?Tu? ?pm?{/G> -oe>ad>q` 9>@T>_S>:w>d>cQ>j"> >,(޼1>_A@>.2([>C>JƸV>f/X>;jٯ>pvly>C>[Q@p>'l^>WT>UImt>2t?>jLdP>yoU#>-rPeak 4i,2_????c92@+ J"=ڬ=0=@y=[K}=/1a*=zp=͆ET==,$=AK+>g>N >%~>/>@iǥ> M!>1l}&>JU,>v1>5>*"N ;>m޾@>AD>mdWI>VݵmO>1H lMS>W>\>Əa>A˙ƒe>D&j>2Xuo>(!<2s>Y50w>~.{>/F/π>J->*>|Z,b>fU:>>/Z>ļ8ݜ>d7>{-&>htq>UM>6eJ[>7l%>N\>.][>5TP>G $>!.m`>͜ >Գ6)>o[OB>Ľ>bV&>M>?xIa>-9$>&a>!>(O>p2>]4f>t d>gD>J>:n>އ>ǡ>N>9"?eQ?,?K,L?0A޻O ?+o ?(G&a?}\?? ž?P -?ͿU?c[?@?`S U? (?V[e&?=l%?U($?^d"?4!?G± ?O ?1)1?3?kz5?lcV?Q0?z`Ql?v?rA#w?b@u &?9 H) ?,d ?V?Tu? ?pm?{/G> -oe>ad>q` 9>@T>_S>:w>d>cQ>j"> >,(޼1>_A@>.2([>C>JƸV>f/X>;jٯ>pvly>C>[Q@p>'l^>WT>UImt>2t?>jLdP>yoU#>cPr  W_sigma_0i????i n@i?d[;/>J`r  W_sigma_1i????Pz@i VG&@ȪB#e?t*{?G`r  W_sigma_2i????]]!@7!G.@IN?Pcv@ EditDuplicateCoefWavesJ!r`8/rPeak 0 Coefsr???? EI5@(l@4{x~VgU?:=`0rPeak 1 Coefsr????Bx@:@^M Na?h= WM_WaveSelectorListesJ!i WM_HierarchicalListesJ!hi HierarchicalListInfo0J!ixr0ListWavei????/PrBaseline Peak 0 Peak 1Linear\JR\W523Fano\JR\W523Fano\JR\W523BaselinePeak 0Peak 1*6BBBBBBBBBBBBBBBBBBBJPVVVVVVVVVVVVVVVVVVVK/rSelWavei????0>BBB WindowCoordinatesfo0J!x'rQ ]x(rW_windowCoordinatesx'r????&rEditOrAddPeaksGraph5070560420 ManualPeaksnatesfo0J!xCrHgLastClickYui6?gLastClickX9ǁw@gMode@gIsEditMode?gThePeakNum?inited?gMessage!Click and drag to create new peakUserCallbackMPF2_PeakEditCallbackTheGraphackJ81rpeakNameListxCr????x2rEditPeak 1 M`2rpeakCoefArrayxCr???? ?K?௢@@0@00r,tmpPeakxCr,K????d`a@P2rwcoefxCr????B C?wF: DA+P2rwcoefsavxCr?????G\: DRA *6// Platform=WindowsNT, IGORVersion=6.341, architecture=Intel, systemTextEncoding="Windows-1252", historyTextEncoding="Windows-1252", procwinTextEncoding="Windows-1252" Silent 101 // use | as bitwise or -- not comment. SetDataFolder root:Packages:MultiPeakFit2:MPF_SetFolder_4: DefaultFont "Arial" MoveWindow/P 23.5,45,523.5,340 Table0() Table1() Table2() Graph0() MoveWindow/C 7,387,916,478 MultiPeak2StarterPanel() MultipeakFit_Set4() KillStrings/Z root:gWMSetNextTextFilesTextEncoding Window MultipeakFit_Set4() : Graph PauseUpdate; Silent 1 // building window... String fldrSav0= GetDataFolder(1) SetDataFolder root:Packages:MultiPeakFit2:MPF_SetFolder_4: Display /W=(311.5,51.5,706.5,259.5) ::::yFano2 vs ::::xFano2 AppendToGraph/L=Res_left Res_yFano2 vs ::::xFano2 AppendToGraph Bkg_yFano2,fit_yFano2 AppendToGraph/L=Peaks_Left 'Peak 0','Peak 1' SetDataFolder fldrSav0 ModifyGraph rgb(Bkg_yFano2)=(2,39321,1),rgb(fit_yFano2)=(1,4,52428) ModifyGraph lblPosMode(Res_left)=1,lblPosMode(Peaks_Left)=1 ModifyGraph lblPos(left)=66 ModifyGraph freePos(Res_left)={0,kwFraction} ModifyGraph freePos(Peaks_Left)={0,kwFraction} ModifyGraph axisEnab(left)={0.25,0.75} ModifyGraph axisEnab(Res_left)={0.8,1} ModifyGraph axisEnab(Peaks_Left)={0,0.2} SetAxis left 1.0033472,1.007 SetAxis bottom 1100.1953,1500 Cursor/P A yFano2 259;Cursor/P B yFano2 33 ShowInfo Tag/C/N=PeakTag0/F=0/B=1/A=MB/X=0.00/Y=1.00/L=0/P=1 'Peak 0', 1277.13078104447322, "\\Zr0800" Tag/C/N=PeakTag1/F=0/B=1/A=MB/X=0.00/Y=1.00/L=0/P=1 'Peak 1', 1293.95704722815071, "\\Zr0801" SetDrawLayer ProgBack SetDrawEnv xcoord= bottom,ycoord= prel,linefgc= (56797,56797,56797) DrawLine 1276.65171679316,0,1276.65171679316,1 SetDrawEnv xcoord= bottom,ycoord= prel,linefgc= (56797,56797,56797) DrawLine 1293.61876478198,0,1293.61876478198,1 SetDrawLayer UserFront SetWindow kwTopWin,hook(PopupWS_HostWindowHook)=PopupWSHostHook SetWindow kwTopWin,hook(MPF2_DataGraphHook)=MPF2_DataGraphHook SetWindow kwTopWin,userdata(MPF2_DataSetNumber)= "4" NewPanel/HOST=#/EXT=0/W=(0,561,440,561) as "Multi-peak Fit Set 4" ModifyPanel fixedSize=0 CheckBox MPF2_UserCursorsCheckbox,pos={10,4},size={107,14},title="Use Graph Cursors" CheckBox MPF2_UserCursorsCheckbox,value= 1 Button MPF2_HelpButton,pos={380,1},size={50,20},proc=MPF2_DoHelpButtonProc,title="Help" DefineGuide UGH0={FT,25},UGH1={UGH0,130},UGH3={FB,-173},UGH2={UGH3,-89} SetWindow kwTopWin,hook(MPF2_PanelKillHook)=MPF2_PanelKillHook SetWindow kwTopWin,hook(MPF2_PanelResizeHook)=MPF2_PanelResizeHook SetWindow kwTopWin,userdata(MPF2_UPDATEPANELVERSION)= "2.15" SetWindow kwTopWin,userdata(MPF2_hostgraph)= "MultipeakFit_Set4" SetWindow kwTopWin,userdata(MPF2_DataSetNumber)= "4" NewPanel/W=(0,86,440,149)/FG=(,UGH0,,UGH1)/HOST=# ModifyPanel frameStyle=0, frameInset=0 GroupBox MPF2_LocatePeaksGroupBox,pos={8,2},size={424,61},title="Locate Peaks" GroupBox MPF2_LocatePeaksGroupBox,fStyle=1 Button MPF2_AutoLocatePeaksButton,pos={141,21},size={158,20},proc=MPF2_AutoLocatePeaksButtonProc,title="Auto-locate Peaks Now" Button MPF2_AutoLocatePeaksButton,fSize=10 CheckBox MPF2_NegativePeaksCheck,pos={177,44},size={94,14},title="Negative Peaks" CheckBox MPF2_NegativePeaksCheck,variable= root:Packages:MultiPeakFit2:MPF_SetFolder_4:negativePeaks CheckBox MPF2_DiscloseAutoPickParams,pos={14,45},size={16,14},proc=MPF2_DiscloseAutoPickCheckProc,title="" CheckBox MPF2_DiscloseAutoPickParams,value= 1,mode=2 SetVariable MPF2_SetAutoFindNoiseLevel,pos={28,65},size={119,16},bodyWidth=60,title="Noise level:" SetVariable MPF2_SetAutoFindNoiseLevel,limits={0,inf,1},value= root:Packages:MultiPeakFit2:MPF_SetFolder_4:AutoFindNoiseLevel SetVariable MPF2_SetAutoPeakSmoothFactor,pos={11,86},size={136,16},bodyWidth=60,title="Smooth Factor:" SetVariable MPF2_SetAutoPeakSmoothFactor,limits={0,inf,1},value= root:Packages:MultiPeakFit2:MPF_SetFolder_4:AutoFindSmoothFactor SetVariable MPF2_SetAutoPeakMinFraction,pos={22,107},size={125,16},bodyWidth=60,title="Min Fraction:" SetVariable MPF2_SetAutoPeakMinFraction,limits={0,inf,1},value= root:Packages:MultiPeakFit2:MPF_SetFolder_4:AutoFindTrimFraction Button MPF2_AutoPickEstimate,pos={157,83},size={85,20},proc=MPF2_EstimateAutoPickPButton,title="Estimate Now" Button MPF2_AutoPickEstimate,fSize=10 RenameWindow #,P0 SetActiveSubwindow ## NewPanel/W=(66,86,199,260)/FG=(FL,UGH1,FR,UGH2)/HOST=# ModifyPanel frameStyle=0, frameInset=0 CheckBox MPF2_DiscloseConstraints,pos={290,5},size={99,14},proc=MPF2_DiscloseConstraints,title="Apply Constraints" CheckBox MPF2_DiscloseConstraints,fSize=10,value= 1 ListBox MPF2_PeakList,pos={6,20},size={424,121},proc=HierarchicalListListProc ListBox MPF2_PeakList,userdata(MPF2_DataSetNumber)= "4" ListBox MPF2_PeakList,userdata(HierarchicalListInfo)= A"!!*'jBk;P0K0;P2K1E;sFD4Q_@;@Vp@;]Xm,>^/rzzzzzzzzzzzzzzz" Button MPF2_SelectMaskWave,userdata(popupWSInfo) += A"!!!!n:e!3I;e9cV@rtFRF)+icG%CXRzzzzzzzzzz!!!!n:e!3I9jr*Y=(-8`;e9cV@rtIaFD5?4zz" Button MPF2_SelectMaskWave,userdata(popupWSInfo) += A"zzzzzzzzzzzzzzzz5]Asgz5]-Q%zzzzzzz5O\\XQzzzzz" Button MPF2_SelectMaskWave,userdata(PopupWS_FullPath)= "_none_" Button MPF2_SelectMaskWave,userdata(PopupWS_SelectableStrings)= "_none_;" TitleBox MPF2_WeightWaveTitle,pos={8,99},size={69,13},title="Weight Wave:" TitleBox MPF2_WeightWaveTitle,fSize=10,frame=0 Button MPF2_SelectWeightWave,pos={75,95},size={179,20},proc=PopupWaveSelectorButtonProc,title="\\JR_none_ \\W623" Button MPF2_SelectWeightWave,userdata(popupWSInfo)= A"!!*'oF_l/6E+NHn7VQsO;e:&-,>E;sFD4Q_@;@Vp@;]Xm,>^/rzzzzzzzzzzzzzzz" Button MPF2_SelectWeightWave,userdata(popupWSInfo) += A"!!!!n:e!3I;e9cV@rtd`BkM+$=(-8`zzzzzzzzzz!!!!n:e!3I=(Q)YBQR //Dialog from the manual/simple curve fitting commands under Analysis->Curve Fitting for a two peak Fano profile Function FanoFit2(w,x) : FitFunc Wave w Variable x //CurveFitDialog/ These comments were created by the Curve Fitting dialog. Altering them will //CurveFitDialog/ make the function less convenient to work with in the Curve Fitting dialog. //CurveFitDialog/ Equation: //CurveFitDialog/ f(x) = (A1*(((q+((x-z1)/(g1/2)))^2)/(1+((x-z1)/(g1/2))^2)))+(A2*(((q+((x-z2)/(g2/2)))^2)/(1+((x-z2)/(g2/2))^2)))+m*x+c*x^2+d //CurveFitDialog/ End of Equation //CurveFitDialog/ Independent Variables 1 //CurveFitDialog/ x //CurveFitDialog/ Coefficients 10 //CurveFitDialog/ w[0] = q //CurveFitDialog/ w[1] = m //CurveFitDialog/ w[2] = c //CurveFitDialog/ w[3] = d //CurveFitDialog/ w[4] = A1 //CurveFitDialog/ w[5] = g1 //CurveFitDialog/ w[6] = z1 //CurveFitDialog/ w[7] = A2 //CurveFitDialog/ w[8] = g2 //CurveFitDialog/ w[9] = z2 return (w[4]*(((w[0]+((x-w[6])/(w[5]/2)))^2)/(1+((x-w[6])/(w[5]/2))^2)))+(w[7]*(((w[0]+((x-w[9])/(w[8]/2)))^2)/(1+((x-w[9])/(w[8]/2))^2)))+w[1]*x+w[2]*x^2+w[3] End //(12/29/14) Attempt to add Fano peak fitting functionality to MPF2 package of Igor Pro template taken from manual and YonatanHo IgorExchange forum post // ********* FANO ********* Function/S Fano_PeakFuncInfo(InfoDesired) Variable InfoDesired String info="" Switch (InfoDEsired) case PeakFuncInfo_ParamNames: info = "Location;Gamma;Amplitude;q" //Location=peak center, Amplitude=peak amplitude, Gamma=Gamma parameter of the Fano line shape, q=Fano asymmetry parameter break; // case PeakFuncInfo_PeakFName: // BUT you must maintain their order of apperance in the parameter w[] wave! info = "Fano_Peak" break; case PeakFuncInfo_GaussConvFName: info = "SimpleLorentzianGuess" break; case PeakFuncInfo_ParameterFunc: info = "Fano_PeakParams" break; case PeakFuncInfo_DerivedParamNames: info = "Location;Gamma;Amplitude;q" // break; default: break; endSwitch return info end Function SimpleLorentzianGuess(w) // Let's assume that a simple Lorentzian is a good guess to start with... (Derivative of Lorentzian might be better but how to implement?) Wave w //Note that the wave is already pre-filled with parameters from the automatic or "by-hand" guess from the side of MPF //assuming a possibly asymmetric Gaussian. //Parameters w[0],w[1],w[2], are corresponding to position, width, and height respectively, Redimension/N=4w // w[0] = Position==>Location // w[1] = Width==>Gamma // w[2] = Height==>Amplitude // w[3] = Constant ==> Fano asymmetry parameter (Note: no relation to parameters of Lorentzian/Gaussian guess) // width of Lorenzian needs to be modified from the estimated Gaussian width (Remember: MPF2 uses Gaussians for auto initial guess) w[2] = w[1]*w[2]*sqrt(pi) return 0 end Function Fano_Peak(w, yw, xw) // The w wave is a 4 object wave that has the fit parameters. Use w[0] to w[3], i.e.; // w[0] = Location // w[1] = Gamma // w[2] = Amplitude // w[3] = Fano asymmetry parameter Wave w, yw, xw yw = w[2]*(((w[3]+((x-w[0])/(w[1]/2)))^2)/(1+((x-w[0])/(w[1]/2))^2)) //Taken from Nano Lett 2012 end Function Fano_PeakParams(cw, sw, outWave) //cw is the wave parameter from the fit, Wave cw, sw, outWave //sw is the standard deviations for the parameters - both are 12 wave parameters as defined in "PeakFuncInfo_DerivedParamNames" //Location (Central position of dispersive lineshape)- outWave[0][0] = cw[0] // This is actually the peak center of a Lorentian. <- Probably the big issue right now in failing. Could a derivative of Lorentzian be used for initial guess instead? outWave[0][1] = sqrt(sw[0][0]) // The error is treated accordingly. //Amplitude (Take a guess) outWave[2][0] = cw[2] outWave[2][1] = NaN //Gamma (linewidth) outWave[1][0] = cw[1] outWave[2][1] = NaN //q (Fano asymmetry parameter) outWave[3][0] = cw[3] outWave[3][1] = NaN End